Coral Reef Ecology and Biology

Course Aim

A course for students with a background in general biology or marine science who wish to become tropical marine biologists specializing in coral reefs and coral reef fish.

Course Description

Discover the largest and most complex biological structures on earth in this introduction to tropical coral reefs and the organisms and processes responsible for their formation. From an overview of reefs and their tropical marine environment, expand into the evolution, systematics, physiology, ecology and symbiosis of reef building corals. Learn about structure and ecological dynamics of coral reef fish communities, and the major characteristics of other key animals and plants on reefs. Recognize key processes on shallow and deep reefs, and variability among reefs, including those of the Okinawan area.  Examine cutting-edge questions in coral reef biology and conservation. Critically analyze natural and human disturbances to reefs with an emphasis on current models of management and conservation.  Design a marine refuge area based on ecological and conservation principles. Develop practical skills in sample and survey methods via snorkeling activities.

Course Contents

Introduction and course assignments

Reef invertebrates

Producers

Fish 1

Fish 2

Reef formation and evolution

Reef zonation

Grazers and grazing

Calcification and bioerosion

Reef resilience

Reproduction of reef species

Nursery habitats

Reef food webs

Biodiversity and biogeography

Survey methods (practical lectures via snorkeling)

The reefs of Japan

Threats to reefs

Reef conservation

Marine reserve design practical

Assessment

25% literature review; 50% final exam; 25% field trip and data analysis

Textbooks

Goldberg, W.M. The Biology of Reefs and Reef Organisms

Sheppard C.R.C, Davy, S.K., and Pilling, G.M. The Biology of Coral Reefs