I obtained my Ph.D. in 2019 from the Evolutionary Biology & Ecology lab at the Free University of Brussels (ULB; Brussels, Belgium). I investigated the ecology and the evolution of the conditional use of sex in a group of phylogenetically related neotropical termites. Notably, we described the first nutritional symbiosis between termites and the endosymbiotic bacterium Wolbachia —notorious for being a master manipulator of arthropod reproductive biology.
I joined the Evolutionary Genomics Unit in November 2019 with a JSPS Postdoctoral Fellowship for Foreign Researchers. I investigate the epidemiology of endosymbiotic bacteria using a near-complete time-calibrated phylogenetic tree of South American termites. I intend to reconstruct the evolutionary history of these bacterial lineages along the termite phylogeny to determine their rates of infection/extinction and influence on termite speciation and mitochondrial diversity. Lastly, I perform comparative genomics analyses to underpin the true nature of these symbioses, either mutualistic (e.g., nutritional mutualism) or parasitic, and identify their underlying molecular mechanisms.
Yi Ming Weng
PosDoc
I am an insect evolutionary biologist who graduated from the Molecular Ecology lab at the University of Wisconsin-Madison in 2022. For my Ph.D., I studied phylogeography and adaptation of alpine ground beetles in the Sierra Nevada of California. After graduation, I worked as a postdoc studying the genome evolution of moths and butterflies at the University of Florida, looking for genes associated with ancient moth evolution. My primary research fields are population genetics, molecular adaptation, and evolutionary genomics. I joined the Evolutionary Genomics Unit at OIST in January 2024 as a postdoctoral researcher, where I am involved in a project focusing on termite genome evolution. My research goal is to bridge macroevolution (e.g., phylogeny) and microevolution (e.g., population genetics) of insects by investigating their genome evolution and molecular adaptation.
Julien Malem
postdoc
A born and raised Parisian, I completed my Ph.D. at the Sorbonne Université in collaboration with the Muséum National d'Histoire Naturelle in 2023 after an eclectic curriculum, including interests in evolutionary developmental biology, morpho-anatomy of marine invertebrates, and more recently insect systematics, phylogeny, and biogeography. My current research revolves around the way geological processes affect the spatial distribution of organisms in deep time and at larger scales, using cockroaches (now including termites!) as a model. My Ph.D. work focused on better grasping the complex origins of the biota of New Caledonia, a long-standing conundrum in biogeography, using information derived both from geological data and time-calibrated phylogenies for some of its so peculiar endemic groups, most notably its extremely diverse and relictual cockroach fauna. In the Evolutionary Genomics Unit, I will continue to work on the phylogenetic history of cockroaches, with a focus on their global-scale biogeography and its interplay with geological processes. By using NGS data recovered from the largest taxonomic sampling possible, including a great number of old museum specimens that were previously unamenable to molecular analyses, I intend to reconstruct large phylogenies based both on traditional markers and genomic data. I am also interested in traditional taxonomy and Natural History in general, and I am more than happy to answer old questions using the cutting-edge methods employed in the Evolutionary Genomics Unit. You can catch me reading, listening to music, or talking to the trees and animals outside.
Esra Kaymak
Research Unit Technician
I worked this past decade at the Free University of Brussels (ULB), Belgium, in the team of Dr. Olivier Hardy, where research projects focus on plant biodiversity, primarily in African rainforests.
Since early 2021, I have been discovering the thrilling world of termites. No need to say it is a new challenge for me, a challenge that I am more than happy to undertake by joining the Evolutionary Genomics Unit. The exquisite research environment, combined with my love for Japanese culture, makes my stay in Okinawa perfect!
My humble hobbies are baking, visiting new places, and hanging out with friends.
Erina Kawai
Research Unit Technician
I was born and raised in Nagoya, Japan. I obtained a master’s degree at the University of Ryukyus.
As a student, I studied the taxonomy of octocorals in Okinawa.
Initially, I used to work for marine science at OIST. Still, I wanted to challenge myself and start something new, so I joined the Evolutionary Genomics Unit in December 2024 to support microphotography and molecular experiments.
I love exploring nature, running, dogs, and sweets.
Kensei Kikuchi
PhD Student
My name is Kensei. I obtained a bachelor's degree in engineering (material science), and I joined OIST as a Ph.D. student in May 2020. I have a long-time passion for sociobiology. In particular, I am interested in studying how biological and behavioral diversity has evolved. My goal is to identify the factors at the origin of eusociality in social insects. I want to determine the meaning of behaviors and identify the patterns found among different species. In the Evolutionary Genomics Unit, I will work on behavioral experiments to study the effect of group size and caste ratio on individual termite behavior.
Cong Liu
PhD Student
BSc in Biotechnology, Sun Yat-sen University, China.
MRes in Computational Methods in Ecology and Evolution, Imperial College, UK.
I am interested in host-microbe symbiosis and want to look into how such relationships have influenced host evolution. I studied the evolutionary genomics of mangrove trees for my bachelor thesis and did metagenomic data analysis during my master course. In the Evolutionary Genomics Unit, I am studying how termite genomes evolve in response to their gut microbiome function and composition.
Zhuli Cheng
PhD Student
I am a Ph.D. student interested in evolutionary biology, and I am most fascinated by what genomes can tell us about the billions of years that life went through. In the Bourguignon Unit, I hope to learn how genomes evolve. For that purpose, I am excited to participate in our project that looks at how strains of Blattabacterium cuenoti, an obligate intracellular symbiont living in cockroaches and termites, gradually lost many of their genes over the last 200 million years.
Anastasiia Ishchenko
PhD Student
I am Anastasiia. I was born and raised in a small village in the center of Ukraine. My scientific interests mostly focus on evolutionary biology, with a background in ecology and cell biology. During my Bachelor's studies, I worked on the ecology of tree species in urban environments. During my Master's studies, I decided to focus on DNA damage in mammalian spermatozoa. My Master's research became my transition point from ecological to genetic studies, and more specifically to evolution. In the Evolutionary Genomics Unit, I examine the correlation between termite gut microbiome and diet, as reflected by stable isotope data. My free time is mostly dedicated to my cat, video games, knitting, and painting.
Wahei Hagiwara
Ph.D. Student
As a native of Okinawa, it is a great opportunity for me to do Ph.D. at OIST!
During my bachelor's thesis, I engaged in RNA-seq of the brown algae called mozuku, a delicacy of Okinawa. In the Evolutionary Genomics Unit, I am working on low-coverage genome datasets of termite, cockroach, and their symbiotic bacteria and protists. I aim to build robust phylogenetic trees of termite gut protists and determine how they have coevolved with their termite hosts during the last 150 million years.
During my free time, I like watching movies and anime and playing piano. In addition, Karaoke is one of my favorite ways to release stress!
Kazuko Toyoda
Research Unit Administrator
I am an Osakan who has been in love with Okinawan oceans for years and finally made a move to live here in April 2021. Before joining OIST, I have been involved in various business industries over the past 25 years, including airline, entertainment, telecommunication, Solar PV, and other industries. At OIST, I help the Evolutionary Genomics Unit to perform research smoothly. I love spending time on the beach, in the ocean, and in my kitchen. I am so excited to join and support the team!
Arina Mazurova
Rotation Student
I graduated from Moscow State University as a molecular biologist, then worked as a junior researcher, a biology teacher, a museum scientific consultant, and a research unit technician at OIST. I entered the PhD program at OIST in 2024, and I am interested in small non-coding RNAs and the molecular mechanisms underlying evolutionary events, like host-pathogen (or host-symbiont) co-evolution and interaction. I am, first and foremost, a wet lab practitioner, but I am willing to learn new skills and thus picked the Evolutionary Genomics unit for my out-of-field rotation.